the bioinformatics chat

A podcast about computational biology, bioinformatics, and next generation sequencing.

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episode 12: Modelling the immune system and C-ImmSim with Filippo Castiglione


In this episode, Filippo Castiglione and I discuss different ways to model the immune system.

Links:

  • Celada’s and Seiden’s 1992 paper, “A computer model of cellular interactions in the immune system”
  • Filippo’s 2001 paper, “Design and implementation of an immune system simulator”
  • PLOS One paper, “Computational Immunology Meets Bioinformatics: The Use of Prediction Tools for Molecular Binding in the Simulation of the Immune System”
  • A paper about modelling sea bass vaccination using C-ImmSim
  • C-ImmSim homepage
  • The online simulator based on C-ImmSim and the paper describing it

Special thanks to Martina Stoycheva for bringing this work to my attention.

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 October 8, 2017  1h6m