A podcast about computational biology, bioinformatics, and next generation sequencing.
https://bioinformatics.chat
episode 10: Spatially variable genes and SpatialDE with Valentine Svensson
Valentine Svensson explains how he analyzes spatially-annotated single cell gene expression data using Gaussian processes.
Links:
- Valentine’s preprint, “SpatialDE - Identification Of Spatially Variable Genes”
- SpatialDE code on GitHub
- Valentine’s personal page
- The Integrative Biology & Medicine conference
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