A podcast about computational biology, bioinformatics, and next generation sequencing.
https://bioinformatics.chat
episode 47: Reproducible pipelines and NGLess with Luis Pedro Coelho
NGLess is a programming language specifically targeted at next generation sequencing (NGS) data processing. In this episode we chat with its main developer, Luis Pedro Coelho, about the benefits of domain-specific languages, pros and cons of Haskell in bioinformatics, reproducibility, and of course NGLess itself.
Links:
- NGLess on GitHub
- NG-meta-profiler: fast processing of metagenomes using NGLess, a domain-specific language (Luis Pedro Coelho, Renato Alves, Paulo Monteiro, Jaime Huerta-Cepas, Ana Teresa Freitas, Peer Bork)
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